Introduction to WinBUGS for Ecologists

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  • Publisher : Academic Press
  • Release : 19 July 2010
  • ISBN : 0123786061
  • Page : 320 pages
  • Rating : 5/5 from 1 voters

Introduction to WinBUGS for Ecologists Book PDF summary

Introduction to WinBUGS for Ecologists introduces applied Bayesian modeling to ecologists using the highly acclaimed, free WinBUGS software. It offers an understanding of statistical models as abstract representations of the various processes that give rise to a data set. Such an understanding is basic to the development of inference models tailored to specific sampling and ecological scenarios. The book begins by presenting the advantages of a Bayesian approach to statistics and introducing the WinBUGS software. It reviews the four most common statistical distributions: the normal, the uniform, the binomial, and the Poisson. It describes the two different kinds of analysis of variance (ANOVA): one-way and two- or multiway. It looks at the general linear model, or ANCOVA, in R and WinBUGS. It introduces generalized linear model (GLM), i.e., the extension of the normal linear model to allow error distributions other than the normal. The GLM is then extended contain additional sources of random variation to become a generalized linear mixed model (GLMM) for a Poisson example and for a binomial example. The final two chapters showcase two fairly novel and nonstandard versions of a GLMM. The first is the site-occupancy model for species distributions; the second is the binomial (or N-) mixture model for estimation and modeling of abundance. Introduction to the essential theories of key models used by ecologists Complete juxtaposition of classical analyses in R and Bayesian analysis of the same models in WinBUGS Provides every detail of R and WinBUGS code required to conduct all analyses Companion Web Appendix that contains all code contained in the book and additional material (including more code and solutions to exercises)

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Introduction to WinBUGS for Ecologists

Introduction to WinBUGS for Ecologists
  • Author : Marc Kery
  • Publisher : Academic Press
  • Release Date : 2010-07-19
  • ISBN : 0123786061
DOWNLOAD BOOKIntroduction to WinBUGS for Ecologists

Introduction to WinBUGS for Ecologists introduces applied Bayesian modeling to ecologists using the highly acclaimed, free WinBUGS software. It offers an understanding of statistical models as abstract representations of the various processes that give rise to a data set. Such an understanding is basic to the development of inference models tailored to specific sampling and ecological scenarios. The book begins by presenting the advantages of a Bayesian approach to statistics and introducing the WinBUGS software. It reviews the four most

Bayesian Population Analysis Using WinBUGS

Bayesian Population Analysis Using WinBUGS
  • Author : Marc Kéry,Michael Schaub
  • Publisher : Academic Press
  • Release Date : 2012
  • ISBN : 9780123870209
DOWNLOAD BOOKBayesian Population Analysis Using WinBUGS

Bayesian statistics has exploded into biology and its sub-disciplines, such as ecology, over the past decade. The free software program WinBUGS, and its open-source sister OpenBugs, is currently the only flexible and general-purpose program available with which the average ecologist can conduct standard and non-standard Bayesian statistics. Comprehensive and richly commented examples illustrate a wide range of models that are most relevant to the research of a modern population ecologist All WinBUGS/OpenBUGS analyses are completely integrated in software R

Bayesian Methods for Ecology

Bayesian Methods for Ecology
  • Author : Michael A. McCarthy
  • Publisher : Cambridge University Press
  • Release Date : 2007-05-10
  • ISBN : 9781139463874
DOWNLOAD BOOKBayesian Methods for Ecology

The interest in using Bayesian methods in ecology is increasing, however many ecologists have difficulty with conducting the required analyses. McCarthy bridges that gap, using a clear and accessible style. The text also incorporates case studies to demonstrate mark-recapture analysis, development of population models and the use of subjective judgement. The advantages of Bayesian methods, are also described here, for example, the incorporation of any relevant prior information and the ability to assess the evidence in favour of competing hypotheses.

Bayesian Analysis for Population Ecology

Bayesian Analysis for Population Ecology
  • Author : Ruth King,Byron Morgan,Olivier Gimenez,Steve Brooks
  • Publisher : CRC Press
  • Release Date : 2009-10-30
  • ISBN : 1439811881
DOWNLOAD BOOKBayesian Analysis for Population Ecology

Novel Statistical Tools for Conserving and Managing PopulationsBy gathering information on key demographic parameters, scientists can often predict how populations will develop in the future and relate these parameters to external influences, such as global warming. Because of their ability to easily incorporate random effects, fit state-space mode

Spatial Capture-Recapture

Spatial Capture-Recapture
  • Author : J. Andrew Royle,Richard B. Chandler,Rahel Sollmann,Beth Gardner
  • Publisher : Academic Press
  • Release Date : 2013-08-27
  • ISBN : 9780124071520
DOWNLOAD BOOKSpatial Capture-Recapture

Spatial Capture-Recapture provides a comprehensive how-to manual with detailed examples of spatial capture-recapture models based on current technology and knowledge. Spatial Capture-Recapture provides you with an extensive step-by-step analysis of many data sets using different software implementations. The authors' approach is practical – it embraces Bayesian and classical inference strategies to give the reader different options to get the job done. In addition, Spatial Capture-Recapture provides data sets, sample code and computing scripts in an R package. Comprehensive reference on revolutionary

Analysis and Management of Animal Populations

Analysis and Management of Animal Populations
  • Author : Byron K. Williams,James D. Nichols,Michael J. Conroy
  • Publisher : Academic Press
  • Release Date : 2002-05
  • ISBN : 9780127544069
DOWNLOAD BOOKAnalysis and Management of Animal Populations

Analysis and Management of Animal Populations deals with the processes involved in making informed decisions about the management of animal populations. It covers the modeling of population responses to management actions, the estimation of quantities needed in the modeling effort, and the application of these estimates and models to the development of sound management decisions. The book synthesizes and integrates in a single volume the methods associated with these themes, as they apply to ecological assessment and conservation of animal

Integrated Population Models

Integrated Population Models
  • Author : Michael Schaub,Marc Kery
  • Publisher : Academic Press
  • Release Date : 2021-11-23
  • ISBN : 9780128209158
DOWNLOAD BOOKIntegrated Population Models

Integrated Population Models: Theory and Ecological Applications with R and JAGS is the first book on integrated population models, which constitute a powerful framework for combining multiple data sets from the population and the individual levels to estimate demographic parameters, and population size and trends. These models identify drivers of population dynamics and forecast the composition and trajectory of a population. Written by two population ecologists with expertise on integrated population modeling, this book provides a comprehensive synthesis of the

Ecological Models and Data in R

Ecological Models and Data in R
  • Author : Benjamin M. Bolker
  • Publisher : Princeton University Press
  • Release Date : 2008-07-21
  • ISBN : 9780691125220
DOWNLOAD BOOKEcological Models and Data in R

Introduction and background; Exploratory data analysis and graphics; Deterministic functions for ecological modeling; Probability and stochastic distributions for ecological modeling; Stochatsic simulation and power analysis; Likelihood and all that; Optimization and all that; Likelihood examples; Standar statistics revisited; Modeling variance; Dynamic models.

Introduction to Hierarchical Bayesian Modeling for Ecological Data

Introduction to Hierarchical Bayesian Modeling for Ecological Data
  • Author : Eric Parent,Etienne Rivot
  • Publisher : CRC Press
  • Release Date : 2012-08-21
  • ISBN : 9781584889199
DOWNLOAD BOOKIntroduction to Hierarchical Bayesian Modeling for Ecological Data

Making statistical modeling and inference more accessible to ecologists and related scientists, Introduction to Hierarchical Bayesian Modeling for Ecological Data gives readers a flexible and effective framework to learn about complex ecological processes from various sources of data. It also helps readers get started on building their own statistical models. The text begins with simple models that progressively become more complex and realistic through explanatory covariates and intermediate hidden states variables. When fitting the models to data, the authors gradually

Introduction to Bayesian Methods in Ecology and Natural Resources

Introduction to Bayesian Methods in Ecology and Natural Resources
  • Author : Edwin J. Green,Andrew O. Finley,William E. Strawderman
  • Publisher : Springer Nature
  • Release Date : 2020-11-26
  • ISBN : 9783030607500
DOWNLOAD BOOKIntroduction to Bayesian Methods in Ecology and Natural Resources

This book presents modern Bayesian analysis in a format that is accessible to researchers in the fields of ecology, wildlife biology, and natural resource management. Bayesian analysis has undergone a remarkable transformation since the early 1990s. Widespread adoption of Markov chain Monte Carlo techniques has made the Bayesian paradigm the viable alternative to classical statistical procedures for scientific inference. The Bayesian approach has a number of desirable qualities, three chief ones being: i) the mathematical procedure is always the same,

Hierarchical Modeling and Inference in Ecology

Hierarchical Modeling and Inference in Ecology
  • Author : J. Andrew Royle,Robert M. Dorazio
  • Publisher : Elsevier
  • Release Date : 2008-10-15
  • ISBN : 9780080559254
DOWNLOAD BOOKHierarchical Modeling and Inference in Ecology

A guide to data collection, modeling and inference strategies for biological survey data using Bayesian and classical statistical methods. This book describes a general and flexible framework for modeling and inference in ecological systems based on hierarchical models, with a strict focus on the use of probability models and parametric inference. Hierarchical models represent a paradigm shift in the application of statistics to ecological inference problems because they combine explicit models of ecological system structure or dynamics with models of

Applied Hierarchical Modeling in Ecology: Analysis of distribution, abundance and species richness in R and BUGS

Applied Hierarchical Modeling in Ecology: Analysis of distribution, abundance and species richness in R and BUGS
  • Author : Marc Kery,J. Andrew Royle
  • Publisher : Academic Press
  • Release Date : 2015-11-14
  • ISBN : 9780128014868
DOWNLOAD BOOKApplied Hierarchical Modeling in Ecology: Analysis of distribution, abundance and species richness in R and BUGS

Applied Hierarchical Modeling in Ecology: Distribution, Abundance, Species Richness offers a new synthesis of the state-of-the-art of hierarchical models for plant and animal distribution, abundance, and community characteristics such as species richness using data collected in metapopulation designs. These types of data are extremely widespread in ecology and its applications in such areas as biodiversity monitoring and fisheries and wildlife management. This first volume explains static models/procedures in the context of hierarchical models that collectively represent a unified approach

Bayesian Models

Bayesian Models
  • Author : N. Thompson Hobbs,Mevin B. Hooten
  • Publisher : Princeton University Press
  • Release Date : 2015-08-04
  • ISBN : 9781400866557
DOWNLOAD BOOKBayesian Models

Bayesian modeling has become an indispensable tool for ecological research because it is uniquely suited to deal with complexity in a statistically coherent way. This textbook provides a comprehensive and accessible introduction to the latest Bayesian methods—in language ecologists can understand. Unlike other books on the subject, this one emphasizes the principles behind the computations, giving ecologists a big-picture understanding of how to implement this powerful statistical approach. Bayesian Models is an essential primer for non-statisticians. It begins with

Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and Stan

Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and Stan
  • Author : Franzi Korner-Nievergelt,Tobias Roth,Stefanie von Felten,Jérôme Guélat,Bettina Almasi,Pius Korner-Nievergelt
  • Publisher : Academic Press
  • Release Date : 2015-04-04
  • ISBN : 9780128016787
DOWNLOAD BOOKBayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and Stan

Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and STAN examines the Bayesian and frequentist methods of conducting data analyses. The book provides the theoretical background in an easy-to-understand approach, encouraging readers to examine the processes that generated their data. Including discussions of model selection, model checking, and multi-model inference, the book also uses effect plots that allow a natural interpretation of data. Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and STAN introduces

Applied Hierarchical Modeling in Ecology: Analysis of Distribution, Abundance and Species Richness in R and BUGS

Applied Hierarchical Modeling in Ecology: Analysis of Distribution, Abundance and Species Richness in R and BUGS
  • Author : Marc Kery,J. Andrew Royle
  • Publisher : Academic Press
  • Release Date : 2020-10-10
  • ISBN : 9780128097274
DOWNLOAD BOOKApplied Hierarchical Modeling in Ecology: Analysis of Distribution, Abundance and Species Richness in R and BUGS

Applied Hierarchical Modeling in Ecology: Analysis of Distribution, Abundance and Species Richness in R and BUGS, Volume Two: Dynamic and Advanced Models provides a synthesis of the state-of-the-art in hierarchical models for plant and animal distribution, also focusing on the complex and more advanced models currently available. The book explains all procedures in the context of hierarchical models that represent a unified approach to ecological research, thus taking the reader from design, through data collection, and into analyses using a